PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0521s0060.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 106aa    MW: 11663.9 Da    PI: 5.176
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0521s0060.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.5e-201158253
                     AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53
                            +y+GVr +k +g+WvAeIr p++   r r++lg++ taeeAa+a++aa  +l
  SapurV1A.0521s0060.1.p 11 RYRGVRMRK-WGKWVAEIRQPNS---RNRIWLGSYNTAEEAARAYDAAVFCL 58
                            69*****99.**********943...49********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.2E-261173IPR001471AP2/ERF domain
PROSITE profilePS5103220.5741169IPR001471AP2/ERF domain
CDDcd000187.59E-241158No hitNo description
Gene3DG3DSA:3.30.730.108.9E-271162IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-191160IPR016177DNA-binding domain
PfamPF008478.2E-141158IPR001471AP2/ERF domain
PRINTSPR003678.5E-111223IPR001471AP2/ERF domain
PRINTSPR003678.5E-113450IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    Send to blast
MARERRDCNG RYRGVRMRKW GKWVAEIRQP NSRNRIWLGS YNTAEEAARA YDAAVFCLQD  60
SESGLFEGPS GMSGEVYLSG GGDGEENLEG IPSGAYYQTS GVFVL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1559555e-67EF155955.1 Populus trichocarpa RAP2-like protein (RAP2L14) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011039946.12e-46PREDICTED: ethylene-responsive transcription factor ERF016-like
SwissprotO221743e-23ERF08_ARATH; Ethylene-responsive transcription factor ERF008
TrEMBLA9PLA45e-43A9PLA4_POPTR; RAP2-like protein
STRINGPOPTR_0006s14110.17e-39(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15296813
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.11e-17DREB and EAR motif protein 3